Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs17018511 chr1:212277604 C/T 4.64E-6 527 42.47 31.62 17.28 KM Plot
KIRC rs17036071 chr3:12244544 A/G 2.18E-8 527 2.43 43.42 38.98 KM Plot
KIRC rs17063398 chr4:177529309 A/T 0 522 43.3 28.98 0.6 KM Plot
KIRC rs1710914 chr10:125309148 A/G 5.58E-8 527 3.37 32.73 40.8 KM Plot
KIRC rs17135028 chr6:2431541 A/G 3.14E-7 527 5.23 40.78 39.7 KM Plot
KIRC rs17136498 chr7:7754563 G/A 3.7E-5 521 38.1 50.27 5.47 KM Plot
KIRC rs17169495 chr7:7727066 T/C 6.3E-5 525 38.88 48.48 5.47 KM Plot
KIRC rs17169553 chr7:7739206 T/C 5.0E-5 526 38.47 48.63 5.47 KM Plot
KIRC rs17178758 chr21:44298404 G/A 3.25E-13 523 42.75 32.42 3.37 KM Plot
KIRC rs17178785 chr21:44301452 G/A 3.25E-13 523 42.75 32.42 3.37 KM Plot
KIRC rs17182559 chr21:47703952 T/C 3.81E-11 517 39.08 45.55 7.4 KM Plot
KIRC rs17306426 chr11:23222079 G/T 3.81E-5 527 5.6 45.17 39.53 KM Plot
KIRC rs17586784 chr6:25935227 C/A 2.11E-5 522 41.27 33.82 4.1 KM Plot
KIRC rs17587597 chr6:25986451 G/A 4.13E-9 517 40.6 35.7 3.37 KM Plot
KIRC rs17608626 chr6:2395691 G/A 3.34E-9 519 40 39.87 12.07 KM Plot